nf-core/mnaseseq

MNase-seq analysis pipeline using BWA and DANPOS2.

NextflowPythonPerlHTMLDockerfileworkflowpipelinenextflownucleosome-mapsnucleosome-positioningnucleosomemnase-seqnf-core
This is stars and forks stats for /nf-core/mnaseseq repository. As of 03 May, 2024 this repository has 10 stars and 7 forks.

Introduction nfcore/mnaseseq is a bioinformatics analysis pipeline used for DNA sequencing data obtained via micrococcal nuclease digestion. The pipeline is built using Nextflow, a workflow tool to run tasks across multiple compute infrastructures in a very portable manner. It comes with docker containers making installation trivial and results highly reproducible. Pipeline summary Raw read QC (FastQC) Adapter trimming (Trim Galore!) Alignment (BWA) Mark duplicates (picard) Merge alignments from...
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