nf-core/dualrnaseq

Analysis of Dual RNA-seq data - an experimental method for interrogating host-pathogen interactions through simultaneous RNA-seq.

NextflowPythonShellROtherworkflowrna-seqpipelinenextflowquantificationnf-corehost-pathogendualrna-seqreadmapping
This is stars and forks stats for /nf-core/dualrnaseq repository. As of 04 May, 2024 this repository has 13 stars and 26 forks.

Dual RNA-seq pipeline nf-core/dualrnaseq is a bioinformatics pipeline built using Nextflow, a workflow tool to run tasks across multiple compute infrastructures in a very portable manner. It comes with docker containers making installation trivial and results highly reproducible. Introduction nf-core/dualrnaseq is specifically used for the analysis of Dual RNA-seq data, interrogating host-pathogen interactions through simultaneous RNA-seq. This pipeline has been initially tested with eukaryotic host's...
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