nf-core/bacass

Simple bacterial assembly and annotation pipeline

NextflowGroovyPythonHTMLworkflownanoporepipelinenextflowassemblydenovogenome-assemblydenovo-assemblybacterial-genomesnanopore-sequencingnf-corehybrid-assembly
This is stars and forks stats for /nf-core/bacass repository. As of 02 May, 2024 this repository has 46 stars and 29 forks.

Introduction nf-core/bacass is a bioinformatics best-practice analysis pipeline for simple bacterial assembly and annotation. The pipeline is able to assemble short reads, long reads, or a mixture of short and long reads (hybrid assembly). The pipeline is built using Nextflow, a workflow tool to run tasks across multiple compute infrastructures in a very portable manner. It uses Docker/Singularity containers making installation trivial and results highly reproducible. The Nextflow DSL2 implementation...
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