nf-core/atacseq

ATAC-seq peak-calling and QC analysis pipeline

NextflowPythonRGroovyPerlHTMLworkflowpipelinenextflowatac-seqnf-corechromatin-accessibiity
This is stars and forks stats for /nf-core/atacseq repository. As of 26 Apr, 2024 this repository has 147 stars and 107 forks.

Introduction nfcore/atacseq is a bioinformatics analysis pipeline used for ATAC-seq data. The pipeline is built using Nextflow, a workflow tool to run tasks across multiple compute infrastructures in a very portable manner. It uses Docker/Singularity containers making installation trivial and results highly reproducible. The Nextflow DSL2 implementation of this pipeline uses one container per process which makes it much easier to maintain and update software dependencies. Where possible, these processes...
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