This is stars and forks stats for /nf-core/isoseq repository. As of 29 Apr, 2024 this repository has 16 stars and 6 forks.
Introduction nf-core/isoseq is a bioinformatics best-practice analysis pipeline for Isoseq gene annotation with uLTRA and TAMA. Starting from raw isoseq subreads, the pipeline: Generates the Circular Consensus Sequences (CSS) Clean and polish CCS to create Full Length Non Chimeric (FLNC) reads Maps FLNCs on the genome Define and clean gene models The pipeline is built using Nextflow, a workflow tool to run tasks across multiple compute infrastructures in a very portable manner. It uses Docker/Singularity...
Introduction nf-core/isoseq is a bioinformatics best-practice analysis pipeline for Isoseq gene annotation with uLTRA and TAMA. Starting from raw isoseq subreads, the pipeline: Generates the Circular Consensus Sequences (CSS) Clean and polish CCS to create Full Length Non Chimeric (FLNC) reads Maps FLNCs on the genome Define and clean gene models The pipeline is built using Nextflow, a workflow tool to run tasks across multiple compute infrastructures in a very portable manner. It uses Docker/Singularity...
| repo | techs | stars | weekly | forks | weekly |
|---|---|---|---|---|---|
| nf-core/crisprvar | NextflowHTMLPython | 5 | 0 | 3 | 0 |
| nf-core/genomeassembler | NextflowGroovyPython | 13 | 0 | 5 | 0 |
| nf-core/nanostring | NextflowGroovyR | 6 | +1 | 1 | 0 |
| nf-core/genomeannotator | NextflowGroovyPython | 12 | 0 | 8 | 0 |
| nf-core/ssds | NextflowGroovyPython | 1 | 0 | 2 | 0 |
| nf-core/rnavar | NextflowGroovyPython | 20 | 0 | 20 | 0 |
| nf-core/airrflow | NextflowGroovyPython | 32 | 0 | 20 | 0 |
| nf-core/gwas | NextflowPythonGroovy | 15 | 0 | 14 | 0 |
| nf-core/circrna | NextflowRGroovy | 31 | 0 | 13 | 0 |
| openxpki/openxpki | PerlJavaScriptShell | 472 | 0 | 98 | 0 |