This is stars and forks stats for /nf-core/cageseq repository. As of 06 May, 2024 this repository has 9 stars and 9 forks.
CAGE-seq pipeline. Introduction nf-core/cageseq is a bioinformatics analysis pipeline used for CAGE-seq sequencing data. The pipeline takes raw demultiplexed fastq-files as input and includes steps for linker and artefact trimming (cutadapt), rRNA removal (SortMeRNA, alignment to a reference genome (STAR or bowtie1) and CAGE tag counting and clustering (paraclu). Additionally, several quality control steps (FastQC, RSeQC, MultiQC) are included to allow for easy verification of the results after a...
CAGE-seq pipeline. Introduction nf-core/cageseq is a bioinformatics analysis pipeline used for CAGE-seq sequencing data. The pipeline takes raw demultiplexed fastq-files as input and includes steps for linker and artefact trimming (cutadapt), rRNA removal (SortMeRNA, alignment to a reference genome (STAR or bowtie1) and CAGE tag counting and clustering (paraclu). Additionally, several quality control steps (FastQC, RSeQC, MultiQC) are included to allow for easy verification of the results after a...
| repo | techs | stars | weekly | forks | weekly |
|---|---|---|---|---|---|
| nf-core/kmermaid | NextflowPythonHTML | 18 | 0 | 9 | 0 |
| ArulselvanMadhavan/diffusers-ocaml | OCamlDockerfileMakefile | 21 | 0 | 1 | 0 |
| rin3/W6EL_Ext | Perl | 0 | 0 | 0 | 0 |
| mohammadpz/pytorch_forward_forward | Python | 1.4k | 0 | 136 | 0 |
| Fantasy-Studio/Paint-by-Example | PythonShell | 765 | +6 | 75 | 0 |
| humbertogontijo/homeassistant-roborock | Python | 498 | 0 | 48 | 0 |
| microsoft/Codex-CLI | PythonShellPowerShell | 1.9k | +2 | 231 | 0 |
| opendilab/DI-engine | PythonOther | 2.9k | +24 | 366 | +2 |
| kleiton0x00/RedditC2 | PythonC# | 244 | 0 | 41 | 0 |
| Evil0ctal/Douyin_TikTok_Download_API | PythonJavaScriptCSS | 4.4k | 0 | 768 | 0 |