nf-core/kmermaid

k-mer similarity analysis pipeline

NextflowPythonHTMLDockerfileworkflowpipelinenextflowkmerk-merkmer-frequency-countkmer-countingnf-core
This is stars and forks stats for /nf-core/kmermaid repository. As of 07 May, 2024 this repository has 18 stars and 9 forks.

Compare DNA/RNA/protein sequences on k-mer content. Introduction The pipeline is built using Nextflow, a workflow tool to run tasks across multiple compute infrastructures in a very portable manner. It comes with docker containers making installation trivial and results highly reproducible. Quick Start i. Install nextflow ii. Install either Docker or Singularity for full pipeline reproducibility (please only use Conda as a last resort; see docs) iii. Download the pipeline and test it on a minimal...
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