Ensembl/ensembl-vep

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ensembl-vep VEP (Variant Effect Predictor) predicts the functional effects of genomic variants. Haplosaurus uses phased genotype data to predict whole-transcript haplotype sequences. Variant Recoder translates between different variant encodings. Table of contents Installation and requirements VEP Usage Haplosaurus Usage Output REST Flags Variant Recoder Usage Output Installation and requirements The VEP package requires: gcc, g++ and make Perl (>=5.10 recommended, tested on 5.10, 5.14, 5.18,...