nf-core/testpipeline

A small example pipeline used to test new nf-core infrastructure and common code.

NextflowGroovyPythonHTML
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Introduction nf-core/testpipeline is a bioinformatics pipeline that ... Read QC (FastQC) Present QC for raw reads (MultiQC) Usage Note If you are new to Nextflow and nf-core, please refer to this page on how to set-up Nextflow. Make sure to test your setup with -profile test before running the workflow on actual data. Now, you can run the pipeline using: nextflow run nf-core/testpipeline \ -profile <docker/singularity/.../institute> \ --input samplesheet.csv \ --outdir <OUTDIR> Warning: Please...
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