This is stars and forks stats for /mskcc/phoenix repository. As of 13 May, 2024 this repository has 0 stars and 0 forks.
[phoenix] Introduction phoenix is a bioinformatics pipeline that ... Given a bam, unpacks the bam into fastqs Given xenografts, disambiguates between mouse and human reads If skip_trimming is false (default), trims fastq reads through trimgalore Uses the typical alignment pipeline provided by nf-core/subworkflows/fastq_align_bwa, then MarkDuplicates Read QC (FastQC) Present QC for raw reads (MultiQC) Usage Note If you are new to Nextflow and nf-core, please refer to this page on how to set-up Nextflow. First,...
[phoenix] Introduction phoenix is a bioinformatics pipeline that ... Given a bam, unpacks the bam into fastqs Given xenografts, disambiguates between mouse and human reads If skip_trimming is false (default), trims fastq reads through trimgalore Uses the typical alignment pipeline provided by nf-core/subworkflows/fastq_align_bwa, then MarkDuplicates Read QC (FastQC) Present QC for raw reads (MultiQC) Usage Note If you are new to Nextflow and nf-core, please refer to this page on how to set-up Nextflow. First,...
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