This is stars and forks stats for /lh3/miniprot repository. As of 29 Apr, 2024 this repository has 244 stars and 11 forks.
Getting Started # download and compile git clone https://github.com/lh3/miniprot cd miniprot && make # test file ./miniprot test/DPP3-hs.gen.fa.gz test/DPP3-mm.pep.fa.gz > aln.paf # PAF output ./miniprot --gff test/DPP3-hs.gen.fa.gz test/DPP3-mm.pep.fa.gz > aln.gff # GFF3+PAF output # general command line: index and align in one go (-I sets max intron size based on genome size) ./miniprot -Iut16 --gff genome.fna protein.faa > aln.gff # general command line: index first and...
Getting Started # download and compile git clone https://github.com/lh3/miniprot cd miniprot && make # test file ./miniprot test/DPP3-hs.gen.fa.gz test/DPP3-mm.pep.fa.gz > aln.paf # PAF output ./miniprot --gff test/DPP3-hs.gen.fa.gz test/DPP3-mm.pep.fa.gz > aln.gff # GFF3+PAF output # general command line: index and align in one go (-I sets max intron size based on genome size) ./miniprot -Iut16 --gff genome.fna protein.faa > aln.gff # general command line: index first and...
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