Arcadia-Science/seqqc

This is stars and forks stats for /Arcadia-Science/seqqc repository. As of 29 Apr, 2024 this repository has 26 stars and 0 forks.

seqqc: quality control of raw sequencing data Introduction Arcadia-Science/seqqc is an analysis pipeline for quality control for sequencing data. The pipeline can be used on short or long read sequencing data (in FASTQ format) to identify common problems like the presence of adapters, high sequencing duplication rates, mislabelled samples, and contamination. The pipeline is built using Nextflow, a workflow tool to run tasks across multiple compute infrastructures in a very portable manner. It uses...