This is stars and forks stats for /tseemann/abricate repository. As of 13 May, 2024 this repository has 288 stars and 74 forks.
ABRicate Mass screening of contigs for antimicrobial resistance or virulence genes. It comes bundled with multiple databases: NCBI, CARD, ARG-ANNOT, Resfinder, MEGARES, EcOH, PlasmidFinder, Ecoli_VF and VFDB. Is this the right tool for me? It only supports contigs, not FASTQ reads It only detects acquired resistance genes, NOT point mutations It uses a DNA sequence database, not protein It needs BLAST+ >= 2.7 and any2fasta to be installed It's written in Perl 🐫 If you are happy with the above,...
ABRicate Mass screening of contigs for antimicrobial resistance or virulence genes. It comes bundled with multiple databases: NCBI, CARD, ARG-ANNOT, Resfinder, MEGARES, EcOH, PlasmidFinder, Ecoli_VF and VFDB. Is this the right tool for me? It only supports contigs, not FASTQ reads It only detects acquired resistance genes, NOT point mutations It uses a DNA sequence database, not protein It needs BLAST+ >= 2.7 and any2fasta to be installed It's written in Perl 🐫 If you are happy with the above,...
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