This is stars and forks stats for /nf-core/spatialtranscriptomics repository. As of 25 Apr, 2024 this repository has 28 stars and 8 forks.
Introduction nf-core/spatialtranscriptomics is a bioinformatics analysis pipeline for Spatial Transcriptomics. It can process and analyse 10X spatial data either directly from raw data by running Space Ranger or data already processed by Space Ranger. The pipeline currently consists of the following steps: Raw data processing with Space Ranger (optional) Quality controls and filtering Normalisation Dimensionality reduction and clustering Differential gene expression testing The pipeline is built...
Introduction nf-core/spatialtranscriptomics is a bioinformatics analysis pipeline for Spatial Transcriptomics. It can process and analyse 10X spatial data either directly from raw data by running Space Ranger or data already processed by Space Ranger. The pipeline currently consists of the following steps: Raw data processing with Space Ranger (optional) Quality controls and filtering Normalisation Dimensionality reduction and clustering Differential gene expression testing The pipeline is built...
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