nf-core/differentialabundance

Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq

NextflowGroovyPythonHTMLCSSworkflowrna-seqpipelinenextflowshinydeseq2microarraychip-seqatac-seqdifferential-expressionlimmagseanf-coredifferential-abundance
This is stars and forks stats for /nf-core/differentialabundance repository. As of 25 Apr, 2024 this repository has 27 stars and 20 forks.

Introduction nf-core/differentialabundance is a bioinformatics pipeline that can be used to analyse data represented as matrices, comparing groups of observations to generate differential statistics and downstream analyses. The initial feature set is built around RNA-seq, but we anticipate rapid expansion to include other platforms. The pipeline is built using Nextflow, a workflow tool to run tasks across multiple compute infrastructures in a very portable manner. It uses Docker/Singularity containers...
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