genepi/nf-gwas

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nf-gwas nf-gwas is a Nextflow pipeline to run biobank-scale genome-wide association studies (GWAS) analysis. The pipeline automatically performs numerous pre- and post-processing steps, integrates regression modeling from the REGENIE package and currently supports single-variant, gene-based and interaction testing. All modules are structured in sub-workflows which allows to extend te pipeline to other methods and tools in future. nf-gwas includes an extensive reporting functionality that allows to...