const-ae/lemur

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Latent Embedding Multivariate Regression (LEMUR) The goal of lemur is to simplify analysis the of multi-condition single-cell data. If you have collected a single-cell RNA-seq dataset with more than one condition, lemur predicts for each cell and gene how much the expression would change if the cell had been in the other condition. Furthermore, lemur finds neighborhoods of cells that show consistent differential expression. The results are statistically validated using a pseudo-bulk differential...