chklovski/CheckM2

Assessing the quality of metagenome-derived genome bins using machine learning

ScilabPython
This is stars and forks stats for /chklovski/CheckM2 repository. As of 29 Mar, 2024 this repository has 127 stars and 15 forks.

CheckM2 Rapid assessment of genome bin quality using machine learning. Unlike CheckM1, CheckM2 has universally trained machine learning models it applies regardless of taxonomic lineage to predict the completeness and contamination of genomic bins. This allows it to incorporate many lineages in its training set that have few - or even just one - high-quality genomic representatives, by putting it in the context of all other organisms in the training set. As a result of this machine learning framework,...
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